BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030B12SP1|AL429177
(970 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1750 1831 0.0
>3x_Contig1750
Length = 14427
Score = 1831 bits (917), Expect = 0.0
Identities = 956/971 (98%), Gaps = 4/971 (0%)
Strand = Plus / Minus
Query: 1 gatctttttgtcatgatatttctcaaatgggcgagaagcgaacaatatttgagatggaaa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3203 gatctttttgtcatg-tatttctcaaatgggcgagaagcgaacaatatttgagatggaaa 3145
Query: 61 attgaaaaaggaagataggggagagggaataggttgggagaaaatgtagaggcagatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3144 attgaaaaaggaagataggggagagggaataggttgggagaaaatgtagaggcagatata 3085
Query: 121 tgtatttgttgttgaactggatactgaatagtactgagtggtattggagcwaggggttat 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3084 tgtatttgttgttgaactggatactgaatagtactgagtggtattggagctaggggttat 3025
Query: 181 tccagagttagtagaattaacattgatgttgggctatcgactcagtgttgcagttgataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3024 tccagagttagtagaattaacattgatgttgggctatcgactcagtgttgcagttgataa 2965
Query: 241 tatttggggccgagagtggagtatcgacttataacattctccttggtttcttttatgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2964 tatttggggccgagagtggagtatcgacttataacattctccttggtttcttttatgtag 2905
Query: 301 cctgagatatatatatatatatatacagcataattggtcaggaaatcaacgattccagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2904 cctgagatatatatatatatatatacagcataattggtcaggaaatcaacgattccagaa 2845
Query: 361 ggaatatcgagagaaaaaacccattaatatatagtttctggattatgttactgtaatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2844 ggaatatcgagagaaaaaacccattaatatatagtttctggattatgttactgtaatcaa 2785
Query: 421 gtgcagtatttttgatcctagttcgtcatactttcagcttcatattctacaatgtttaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2784 gtgcagtatttttgatcctagttcgtcatactttcagcttcatattctacaatgtttaaa 2725
Query: 481 aagatggcggcagggaataatccctttaatgccatgaaagaataaaaagatactgagaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2724 aagatggcggcagggaataatccctttaatgccatgaaagaataaaaagatactgagaag 2665
Query: 541 cagatattgccacgtcaattgaaataggcagtccgctacattgcgtacacttaaaacaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2664 cagatattgccacgtcaattgaaataggcagtccgctacattgcgtacacttaaaacaat 2605
Query: 601 atatgatggcaatacccatagccatgttaatgtgccaggcggttcgctttgttatgaatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2604 atatgatggcaatacccatagccatgttaatgtgccaggcggttcgctttgttatgaatt 2545
Query: 661 acctactcaamahttdkgkrkscattaacggkcataaaaagaagtagcttgcagttcatt 720
|||||||||| | || | ||||||||| ||||||||||||||||||||||||||||
Sbjct: 2544 acctactcaacacttgtgtatccattaacggtcataaaaagaagtagcttgcagttcatt 2485
Query: 721 tctaacgcaatatatattacggagggtctttcttcatggaag-cactgacgagaccttgt 779
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2484 tctaacgcaatatatattacggagggtctttcttcatggaagccactgacgagaccttgt 2425
Query: 780 caagtgataacagacaaaaaaaaaagacgcctttttgatagaattacaaaatcaaagagc 839
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2424 caagtgataacagacaaaaaaaaaagacgcc-ttttgatagaattacaaaatcaaagagc 2366
Query: 840 acgatagtgtcttaaggatacgttttacataagaataaatttcgcaaatctctgatcagt 899
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 acgatagtgtctt-aggatacgttttacataagaataaatttcgcaaatctctgatcagt 2307
Query: 900 tactaaatactgtcatgcgtggccttgattgtwacgttccctatctgaaaatattatcat 959
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2306 tactaaatactgtcatgcgtggccttgattgttacgttccctatctgaaaatattatcat 2247
Query: 960 ttattggttga 970
|||||||||||
Sbjct: 2246 ttattggttga 2236
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,087
Number of Sequences: 1807
Number of extensions: 14087
Number of successful extensions: 1901
Number of sequences better than 1.0e-20: 1
length of query: 970
length of database: 10,358,551
effective HSP length: 16
effective length of query: 954
effective length of database: 10,329,639
effective search space: 9854475606
effective search space used: 9854475606
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)